nf-core/MINDAGAP_DUPLICATEFINDER

module

marks duplicate spots along gridline edges.

imaging resolve_bioscience spatial_transcriptomics

Module Information

Repository: https://github.com/nf-core/modules/tree/master/modules/nf-core/mindagap/duplicatefinder
Source: nf-core
Organization: nf-core
Authors: @FloWuenne
Maintainers: @FloWuenne

Takes a single panorama image and fills the empty grid lines with neighbour-weighted values.

License: BSD 3-clause License

Name	Type	Description
0

Include this module in your Nextflow pipeline:

include { MINDAGAP_DUPLICATEFINDER } from 'https://github.com/nf-core/modules/tree/master/modules/nf-core/mindagap/duplicatefinder'