nf-core/phenoimager2mc

module

Formatting PhenoImager TIFF output files into stacked and normalized OME-TIFF files per cycle, compatible as ASHLAR and MCMICRO input.

imaging registration ome-tif Staging MCMICRO

Module Information

Repository: https://github.com/nf-core/modules/tree/master/modules/nf-core/phenoimager2mc
Source: nf-core
Organization: nf-core
Authors: @chiarasch , @kbestak
Maintainers: @chiarasch

PhenoImager output conversion into a stacked and normalized OME-TIFF file per cycle.

License: GPL-2.0 license

Name	Type	Description
0

Include this module in your Nextflow pipeline:

include { PHENOIMAGER2MC } from 'https://github.com/nf-core/modules/tree/master/modules/nf-core/phenoimager2mc'