cellgeni/imaging_mergeoutlines

module

A simple python script to merge outlines from multiple overlapping tiles

image analysis merge polygons outlines shapely

Module Information

Repository: https://github.com/cellgeni/nf-modules/tree/main/modules/sanger-cellgeni/imaging/mergeoutlines
Source: Sanger (cellgeni)
Organization: cellgeni
Authors: @BioinfoTongLI
Maintainers: @BioinfoTongLI

A simple python script to merge outlines from multiple overlapping tiles

License: MIT

Name	Type	Description
0

Name	Type	Description
meta	map	Groovy Map containing sample information e.g. `[ id:'sample1' ]`
{prefix}.wkt	file	merged outlines in wkt format
versions

Include this module in your Nextflow pipeline:

include { IMAGING_MERGEOUTLINES } from 'https://github.com/cellgeni/nf-modules/tree/main/modules/sanger-cellgeni/imaging/mergeoutlines'