cellgeni/microaligner_registration

subworkflow

linear registration non-linear registration microaligner

Module Information

Repository: https://github.com/cellgeni/nf-modules/tree/main/subworkflows/sanger-cellgeni/microaligner_registration
Source: Sanger (cellgeni)
Organization: cellgeni
Authors: @BioinfoTongLI
Maintainers: @BioinfoTongLI

This subworkflow uses the following modules:

Name	Type	Description
images	file	Structure: [ val(meta), path(image) ]

Name	Type	Description
csi	file	Reigtstered images in tif format Structure: [ val(meta), path(tif) ]
versions	file	File containing software versions Structure: [ path(versions.yml) ]

Include this subworkflow in your Nextflow pipeline:

include { MICROALIGNER_REGISTRATION } from 'https://github.com/cellgeni/nf-modules/tree/main/subworkflows/sanger-cellgeni/microaligner_registration'